Abrv.
Definition
Value
Sure_Pc
C oding P robability above which a CDS is interpreted as a sure CDS.
0.1
0.15
0.2
0.25
0.3
0.35
0.4
0.45
0.5
0.55
0.6
0.65
0.7
0.75
0.8
0.85
0.9
0.95
1
Sure_LMin
Min imum L ength of a sure CDS selected.
60
70
80
90
100
110
120
130
140
150
160
170
180
190
200
210
220
230
240
250
260
270
280
290
300
Prob_Pc
Between the Sure-Pc Prob-Pc probable CDS.
0
0.05
0.1
0.15
0.2
0.25
0.3
0.35
0.4
0.45
0.5
0.55
0.6
0.65
0.7
0.75
0.8
0.85
0.9
0.95
1
Prob_LMin
Min imum L ength of a probable CDS
selected.
60
70
80
90
100
110
120
130
140
150
160
170
180
190
200
210
220
230
240
250
260
270
280
290
300
Sure_ss_I
Minimum I nclusion percentage between two sure
CDSs transcribed on the s ame s trands.
0
5
10
15
20
25
30
35
40
45
50
55
60
65
70
75
80
85
90
95
100
Sure_os_I
Minimum I nclusion percentage between two sure
CDSs transcribed on the o pposite s trands.
0
5
10
15
20
25
30
35
40
45
50
55
60
65
70
75
80
85
90
95
100
Sure_prob_O
Maximum O verlapping percentage between a sure
and a probable CDSs transcribed on the opposite strands.
0
5
10
15
20
25
30
35
40
45
50
55
60
65
70
75
80
85
90
95
100
Prob_glob_IO
Maximum glob al score, including both I nclusion and
O verlapping situations, between a probable
CDS and all other probable CDSs being partially or completely in
overlap with this CDS.
0
5
10
15
20
25
30
35
40
45
50
55
60
65
70
75
80
85
90
95
100
110
120
130
140
150
160
170
180
190
200
