Delivery of Service Offer

Service features
  • Access to the MicroScope web site (hosted at Genoscope), which provides an environment for expert annotation and comparative genomics.
  • Technical support is provided by LABGeM for all users.
  • Bioanalysis / Scientific expertise by LABGeM is restricted to « Collaborations » only (contact us for further information).
  • Data conservation and backups (during the whole duration of the service).
  • Computation updates (following the internal rules of the laboratory).
  • Data / sequence updates.
Type of projects

  • Fee / Prices:
    • Free for academics.
    • Sales quote available on demand for non-academics (contact us for further information).
  • Personal login and password for each user, and access rights defined at the level of user groups.
Scientific publications
  • Proper acknowledgement and citation of the MicroScope publication are required in all scientific publications linked to the project.
  • Please use the following sentence for acknowledgements: "The LABGeM (CEA/Genoscope & CNRS UMR8030), the France Génomique and French Bioinformatics Institute national infrastructures (funded as part of Investissement d'Avenir program managed by Agence Nationale pour la Recherche, contracts ANR-10-INBS-09 and ANR-11-INBS-0013) are acknowledged for support within the MicroScope annotation platform."
  • MicroScope publication:
    Vallenet D, Calteau A, Dubois M, Amours P, Bazin A, Beuvin M, Burlot L, Bussell X, Fouteau S, Gautreau G, Lajus A, Langlois J, Planel R, Roche D, Rollin J, Rouy Z, Sabatet V, Médigue C
    «MicroScope: an integrated platform for the annotation and exploration of microbial gene functions through genomic, pangenomic and metabolic comparative analysis»
    Nucleic Acids Res. 2019 Oct. 24
Data Submission
  • Data submission performed by the user, according to the specifications concerning each project type (genome/metagenome, RNAseq, evolution).
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